# rose sample 3

%include protein-defaults

SequenceNum = 6
Relatedness = 250
ChooseFromLeaves = False
TheTree = ((a:3,b:5):7,(c:4,d:3,e:5):6,(f:2,g:3):5,h:3);
TheSequence = "VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR"
TheMutationProbability = [1.0, 1.0, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7,
                          0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 1.0, 0.7,
                          0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7,
                          0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.0, 0.2, 0.1, 0.2,
                          0.1, 0.1, 0.0, 1.0, 1.0, 0.5, 1.0, 1.0, 1.0, 0.7,
                          0.7, 0.7, 0.7, 0.7, 0.0, 0.0, 0.0, 0.0, 0.0, 0.7,
                          0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7,
                          0.7, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 0.7,
                          0.7, 0.7, 0.0, 0.2, 0.2, 0.1, 0.0, 0.7, 1.0, 1.0,
                          1.0, 1.0, 1.0, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7,
                          0.7, 0.7, 0.7, 0.7, 0.1, 0.1, 0.2, 0.2, 0.0, 0.7,
                          0.7, 0.7, 1.0, 1.0, 1.0, 1.0, 1.0, 0.7, 0.7, 0.7,
                          0.7, 0.7, 0.0, 0.1, 0.2, 0.7, 0.7, 0.7, 0.7, 0.7,
                          0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 1.0, 1.0,
                          1.0]

