forester v1.2

forester.tools
Class addsLvaluesToTree

java.lang.Object
  |
  +--forester.tools.addsLvaluesToTree

public class addsLvaluesToTree
extends java.lang.Object

Version:
1.01 -- last modified: 06/19/00
Author:
Christian M. Zmasek

Constructor Summary
addsLvaluesToTree()
           
 
Method Summary
static void main(java.lang.String[] args)
          Adds log L values to a Tree.
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

addsLvaluesToTree

public addsLvaluesToTree()
Method Detail

main

public static void main(java.lang.String[] args)
Adds log L values to a Tree. It is mainly a "main method" to be used in other (Perl) programs.
Parameters:
args[0] - The name (String) of the sequence being placed on all branches by "placesOneNodeOnAllBranches", i.e. the name of the sequence whose placement on the tree is to be determined
args[1] - Filename (String) of the outputfile from puzzle 4.0.2 analysis of outputfile from "placesOneNodeOnAllBranches"
args[2] - Filename (String) of the outputfile of "placesOneNodeOnAllBranches"
args[3] - Filename (String)of the treefile which was the input for "placesOneNodeOnAllBranches", must be unrooted and trifurcated at its basal node
args[4] - Filename (String) for outputfile
See Also:
placesOneNodeOnAllBranches#placesOneNodeOnAllBranches( String[] )

forester v1.2