Brief installation instructions 
SSU-ALIGN 0.1; June 2010
EPN, Mon Jun  7 09:10:06 2010
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These are quick installation instructions. For complete documentation,
including customization, see the Installation chapter in the SSU-ALIGN
User's Guide (Userguide.pdf).

Starting from a source distribution, ssu-align-0.1.tar.gz:
 uncompress and unpack:     tar xfz ssu-align-0.1.tar.gz
 move into new directory:   cd ssu-align-0.1
 configure:                 ./configure
 build:                     make
 automated install:         make install
 automated tests:           make check

 setup environment:         Follow the instructions after the
                            'make install'. They'll explain how to
                            update your PATH, MANPATH, and SSUALIGNDIR
                            environment variables for the current and
                            all subsequent shell sessions.

SSU-ALIGN is developed primarily on Linux and Mac OS/X systems. It is
tested on a variety of UNIX and UNIX-like operating systems. It is
meant to be portable to any POSIX-compliant system with an ANSI C99
compiler, including all UNIX and Macintosh systems. It should also
build on Windows systems with optional POSIX compatibility software
installed, such as Cygwin.

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Eric Nawrocki
HHMI Janelia Farm Research Campus
19700 Helix Drive
Ashburn VA 20147 USA
http://eddylab.org



